MindMap Gallery Prediction model of liver inflammation in patients with chronic hepatitis B combined with hepatic steatosis based on machine learning
This is a mind map about the prediction model of liver inflammation in patients with chronic hepatitis B combined with hepatic steatosis based on machine learning. The main content includes: supplementary materials, the table is not as good as the picture, the words are not as good as the table, abstract, title.
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Establishment of a machine learning-based prediction model for liver inflammation in patients with chronic hepatitis B combined with hepatic steatosis: a cohort study
topic
Development of a machine learning-based model to predict hepatic inflammation in chronic hepatitis B patients with concurrent hepatic steatosis: a cohort study
summary
Background/Purpose
Chronic hepatitis B (CHB)
Hepatic steatosis (HS)
Both CHB and HS are major contributors to chronic liver injury, increasing the risk of cirrhosis and hepatocellular carcinoma
As the coexistence of CHB and HS becomes increasingly common, simple, noninvasive diagnostic methods are needed to accurately assess the severity of liver inflammation
Establishing a machine learning (ML)-based model to detect liver inflammation in patients with CHB combined with HS
method
We conducted a multicenter, retrospective cohort study in China
Treatment-naïve CHB patients with HS confirmed by liver biopsy between April 2004 and September 2022 were included.
Moderate to severe liver inflammation (Scheuer’s system ≥ G3)
Grade G3-G4 is moderate to severe inflammation
The best features for model development were explained by SHapley Additive and the ML algorithm for determining the best accuracy in diagnosing moderate to severe liver inflammation was evaluated by DCA and calibration curves.
From 1,787 treatment-naive CHB and HS patients from 11 hospitals, 689 patients from 9 hospitals were selected to develop the diagnostic model
The remaining two hospitals participated in two independent external validation cohorts, including 509 patients in validation cohort 1 and 589 patients in validation cohort 2
Subgroup analysis was used to determine the performance of the GBC model in subgroups stratified by age, sex, body mass index, HBeAg status, HBV DNA levels, and presence of diabetes
To ensure data relevance and consistency, only laboratory tests performed within 14 days before liver biopsy were considered
Pathological examinations were performed by two independent board-certified pathologists from their respective centers without blinding to the clinical data.
Disagreements were resolved through discussion and consensus was reached. Assessing interobserver variability to assess interpathologist agreement
result
11 features identified regarding inflammation, liver and metabolic function
Gradient boosting classifier (GBC) model showed best performance in predicting moderate to severe liver inflammation
The training set AUC is 0.86
External validation set 1 AUC is 0.89
External validation set 2 AUC is 0.76
in conclusion
GBC model uses simple parameters to predict liver inflammation in CHB patients complicated by HS
It has the potential to guide clinical management and improve patient outcomes
A publicly accessible web tool was generated for the model
Words are not as good as table
Table 1
Baseline characteristics of the cohort
23 variables
4 variable units have different units or add expressions converted into categories
External validation set 2 3 indicators are empty
Table 2
Diagnostic performance of machine learning models for moderate to severe liver inflammation
Not as shown
Figure 1
Flowchart of the study population
Training set 689 cases
External validation set 1 509 cases
External validation set 2 589 cases
Figure 2
SHapley additional explanation diagram
23 variables
A. Gradient boosting classifier
B. Random Forest
C. Extreme Gradient Boosting
D. Adaptive enhancement
E. Gaussian Naive Bayes
F. Logistic regression
G. K nearest neighbor
Figure 3
Diagnostic performance of final machine learning model for moderate to severe liver inflammation in training cohort and external validation cohort
Training set 7 model ROC
External validation set 1 7 model ROC
External validation set 2 5 model ROC
Overlay versus best model
Figure 4
GBC Model Net Benefit in Diagnosing Moderate to Severe Liver Inflammation via Decision Curve Analysis
Supplementary material
Inter-observer variability
interobserver variability
To ensure the robustness of the diagnosis of inflammation, we selected cases from the two largest cohorts, Nanjing Drum Tower Hospital and Hangzhou Normal University Hospital, and evaluated the two pathologists who performed pathological examinations on these cases
Both pathologists are board certified and have at least 5 years of general pathology experience at the time of examination
Using kappa statistics to assess interobserver variability between two pathologists
We use the following classification to evaluate the quality of kappa statistics: 0-20% is poor consistency, 21-40% is fair consistency, 41-60% is fair consistency, 61-80% is good consistency, and 81-100% For excellent consistency
The Kappa statistic is a measure of agreement between observers and is calculated as (Po - Pe) / (1 - Pe), where Po represents the observed agreement between raters and Pe represents chance alone. expected consistency
The result kappa values were 0.76 (Nanjing Drum Tower Hospital) and 0.63 (Hangzhou Normal University Affiliated Hospital) respectively.
Table S1
Population Characteristics of Moderate to Severe Hepatic Inflammation and Non-Moderate to Severe Hepatic Inflammation in the Training and Validation Cohorts
Mixed baseline of positive events for 3 datasets
Table S2
Diagnostic value of different subgroups of GBC models for moderate to severe liver inflammation
6 different subgroups
Figure S1
Diagnostic performance of pre-machine learning model for severe liver inflammation in training cohort
Figure S2
Evaluation of the efficacy of the GBC model in diagnosing moderate to severe liver inflammation using calibration curves